BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029G11SP1|AL429118
(905 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1264 1775 0.0
>3x_Contig1264
Length = 6524
Score = 1775 bits (894), Expect = 0.0
Identities = 903/906 (99%), Gaps = 1/906 (0%)
Strand = Plus / Minus
Query: 1 atcttacaaataagtgatttacattttggcagacatatcgtctcagactccagaaaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5986 atcttacaaataagtgatttacattttggcagacatatcgtctcagactccagaaaagag 5927
Query: 61 aaaccagactcaatttttaggtacgattggcctaatgtccaatttattcattccgttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5926 aaaccagactcaatttttaggtacgattggcctaatgtccaatttattcattccgttatt 5867
Query: 121 agaaacgaaagacccgatttagctgtcattacaggccatatctttaaagatttcaacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5866 agaaacgaaagacccgatttagctgtcattacaggccatatctttaaagatttcaacaaa 5807
Query: 181 aatttagactatgaaagtcaaatattaaagatggtatctcccattatcagcaatgggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5806 aatttagactatgaaagtcaaatattaaagatggtatctcccattatcagcaatgggatt 5747
Query: 241 ccatttcttttcacttggggtgaaccccaagtaacaaccgagtttaaggttaacatttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5746 ccatttcttttcacttggggtgaaccccaagtaacaaccgagtttaaggttaacatttta 5687
Query: 301 aacttcatcaaatctttaccattttgtttgaataaatttgacctcaaaaattcaacttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5686 aacttcatcaaatctttaccattttgtttgaataaatttgacctcaaaaattcaacttat 5627
Query: 361 ttgatgctcccactgctactaccagctaagacacctggcagtcaaaaacaaattggtact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5626 ttgatgctcccactgctactaccagctaagacacctggcagtcaaaaacaaattggtact 5567
Query: 421 atatttgcattcgattcaaatgtaacagaatcgtacaacttcttagataaatttccacga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5566 atatttgcattcgattcaaatgtaacagaatcgtacaacttcttagataaatttccacga 5507
Query: 481 tcaccacaatcggtttacaatctagcatttcagcacttaccgctccatgaatatcgccca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5506 tcaccacaatcggtttacaatctagcatttcagcacttaccgctccatgaatatcgccca 5447
Query: 541 cagggttcatttgcactaattggaaattacgaacagaaaggctcacttgattatatacct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5446 cagggttcatttgcactaattggaaattacgaacagaaaggctcacttgattatatacct 5387
Query: 601 cacactaaagcattcagaaatcttttaggggaaaaggacatcaaggctatttcctgcggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5386 cacactaaagcattcagaaatcttttaggggaaaaggacatcaaggctatttcctgcggt 5327
Query: 661 catgaacatggcaacgattgtwgcgttctctcagatgggaaacagcaaaatctcaagaac 720
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5326 catgaacatggcaacgattgttgcgttctctcagatgggaaacagcaaaatctcaagaac 5267
Query: 721 aatatgtggctatgttatggtggtgtcacaggttatgatcaagcatacgaatctaaagta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5266 aatatgtggctatgttatggtggtgtcacaggttatgatcaagcatacgaatctaaagta 5207
Query: 781 agawttttcaaaattgacaccgagaaaaatgacatcacttcatggaaaagatctatcaaa 840
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5206 agaattttcaaaattgacaccgagaaaaatgacatcacttcatggaaaagatctatcaaa 5147
Query: 841 gatacgtctaaggtttctgattatcaatacatttggagtcgta-cctaaatacacagtag 899
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5146 gatacgtctaaggtttctgattatcaatacatttggagtcgtaccctaaatacacagtag 5087
Query: 900 ttgtgc 905
||||||
Sbjct: 5086 ttgtgc 5081
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7495
Number of Sequences: 1807
Number of extensions: 7495
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)